STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pepBAminopeptidase B, a cysteinylglycinase; Probably plays an important role in intracellular peptide degradation. (431 aa)    
Predicted Functional Partners:
PSHAa2388
Putative cytosol aminopeptidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme; Belongs to the peptidase M17 family.
  
 
 
0.931
pepA
Cytosol aminopeptidase (Leucine aminopeptidase, Leucyl aminopeptidase); Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
  
  
 
0.925
pepA-2
Probable cytosol aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
  
  
 
0.924
PSHAb0302
Putative aminopeptidase; Function of strongly homologous gene; enzyme; Belongs to the peptidase M17 family.
  
  
 
0.922
gshB
Glutathione synthetase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the prokaryotic GSH synthase family.
   
 
 0.913
pepN
Aminopeptidase N, a cysteinylglycinase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
   
 0.912
PSHAa2204
Putative hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
  
 
 0.905
PSHAa1566
Putative gamma-glutamyltranspeptidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
     
 0.904
gshA
Glutamate--cysteine ligase (Gamma-glutamylcysteine synthetase) (Gamma-ECS) (GCS); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily.
     
 0.901
gshA-2
Glutamate--cysteine ligase (Gamma-glutamylcysteine synthetase) (Gamma-ECS) (GCS); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily.
     
 0.901
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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