STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSHAa0631Putative transpeptidase family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme. (207 aa)    
Predicted Functional Partners:
PSHAa0630
Homologs of previously reported genes of unknown function.
 
   
 0.952
PSHAa0629
Homologs of previously reported genes of unknown function.
 
    0.883
PSHAa0627
Putative sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component.
 
     0.867
PSHAa0628
Homologs of previously reported genes of unknown function.
 
   
 0.842
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
     
 0.802
PSHAb0200
Putative secreted serine protease, subtilisin family, possibly excreted; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme; Belongs to the peptidase S8 family.
 
  
 0.581
PSHAb0049
Putative orphan protein; No homology to any previously reported sequences.
  
     0.523
PSHAb0050
Homologs of previously reported genes of unknown function.
  
     0.522
PSHAa2057
Homologs of previously reported genes of unknown function.
  
     0.513
PSHAa1883
Homologs of previously reported genes of unknown function.
  
     0.511
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.