Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PSHAa0644Putative two-component response regulator with GGDEF domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; regulator. (307 aa)    
Predicted Functional Partners:
PSHAa0134
Homologs of previously reported genes of unknown function.
 
 0.982
CheB
Response regulator CheB (receptor modification enzyme, protein-glutamate methylesterase); Function of homologous gene experimentally demonstrated in an other organism; regulator.
 
  
 0.948
PSHAb0191
Homologs of previously reported genes of unknown function; membrane component.
   
 0.938
PSHAa2265
Homologs of previously reported genes of unknown function.
 
 
 0.903
PSHAa2767
Homologs of previously reported genes of unknown function.
 
 
 
 0.899
PSHAa2203
Homologs of previously reported genes of unknown function.
    0.887
PSHAa1380
Homologs of previously reported genes of unknown function.
    0.872
PSHAa0456
Putative HAMP domain/GGDEF domain/EAL domain protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy.
 
   0.813
PSHAa1106
Putative membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component.
 
  
 0.801
PSHAa2428
Putative metal-dependent phosphohydrolase, HD region; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
 
 
 0.798
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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