Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| PSHAa0673 | rplD | PSHAa0673 | PSHAa0145 | Putative ribosomal subunit interface protein, similar to protein Y; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; factor. | 50S ribosomal subunit protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 0.853 |
| PSHAa0673 | rplI | PSHAa0673 | PSHAa2439 | Putative ribosomal subunit interface protein, similar to protein Y; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; factor. | 50S ribosomal subunit protein L9; Binds to the 23S rRNA. | 0.841 |
| PSHAa0673 | rpmA | PSHAa0673 | PSHAa2655 | Putative ribosomal subunit interface protein, similar to protein Y; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; factor. | 50S ribosomal subunit protein L27; Function of homologous gene experimentally demonstrated in an other organism; structural protein; Belongs to the bacterial ribosomal protein bL27 family. | 0.848 |
| PSHAa0673 | rpmC | PSHAa0673 | PSHAa0152 | Putative ribosomal subunit interface protein, similar to protein Y; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; factor. | 50S ribosomal subunit protein L29; Function of homologous gene experimentally demonstrated in an other organism; structural protein; Belongs to the universal ribosomal protein uL29 family. | 0.840 |
| PSHAa0673 | rpmH | PSHAa0673 | PSHAa3026 | Putative ribosomal subunit interface protein, similar to protein Y; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; factor. | 50S ribosomal subunit protein L34; Function of homologous gene experimentally demonstrated in an other organism; structural protein; Belongs to the bacterial ribosomal protein bL34 family. | 0.843 |
| PSHAa0673 | rpsD | PSHAa0673 | PSHAa2807 | Putative ribosomal subunit interface protein, similar to protein Y; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; factor. | 30S ribosomal subunit protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.838 |
| PSHAa0673 | rpsI | PSHAa0673 | PSHAa2531 | Putative ribosomal subunit interface protein, similar to protein Y; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; factor. | 30S ribosomal subunit protein S9; Function of homologous gene experimentally demonstrated in an other organism; structural protein; Belongs to the universal ribosomal protein uS9 family. | 0.844 |
| PSHAa0673 | rpsL | PSHAa0673 | PSHAa0224 | Putative ribosomal subunit interface protein, similar to protein Y; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; factor. | 30S ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy. | 0.836 |
| PSHAa0673 | rpsP | PSHAa0673 | PSHAa0944 | Putative ribosomal subunit interface protein, similar to protein Y; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; factor. | 30S ribosomal subunit protein S16; Function of homologous gene experimentally demonstrated in an other organism; structural protein; Belongs to the bacterial ribosomal protein bS16 family. | 0.836 |
| PSHAa0673 | rpsU | PSHAa0673 | PSHAa0352 | Putative ribosomal subunit interface protein, similar to protein Y; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; factor. | 30S ribosomal subunit protein S21; Function of homologous gene experimentally demonstrated in an other organism; structural protein; Belongs to the bacterial ribosomal protein bS21 family. | 0.849 |
| rplD | PSHAa0673 | PSHAa0145 | PSHAa0673 | 50S ribosomal subunit protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | Putative ribosomal subunit interface protein, similar to protein Y; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; factor. | 0.853 |
| rplD | rplI | PSHAa0145 | PSHAa2439 | 50S ribosomal subunit protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 50S ribosomal subunit protein L9; Binds to the 23S rRNA. | 0.995 |
| rplD | rpmA | PSHAa0145 | PSHAa2655 | 50S ribosomal subunit protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 50S ribosomal subunit protein L27; Function of homologous gene experimentally demonstrated in an other organism; structural protein; Belongs to the bacterial ribosomal protein bL27 family. | 0.992 |
| rplD | rpmC | PSHAa0145 | PSHAa0152 | 50S ribosomal subunit protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 50S ribosomal subunit protein L29; Function of homologous gene experimentally demonstrated in an other organism; structural protein; Belongs to the universal ribosomal protein uL29 family. | 0.999 |
| rplD | rpmH | PSHAa0145 | PSHAa3026 | 50S ribosomal subunit protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 50S ribosomal subunit protein L34; Function of homologous gene experimentally demonstrated in an other organism; structural protein; Belongs to the bacterial ribosomal protein bL34 family. | 0.971 |
| rplD | rpsD | PSHAa0145 | PSHAa2807 | 50S ribosomal subunit protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 30S ribosomal subunit protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.999 |
| rplD | rpsI | PSHAa0145 | PSHAa2531 | 50S ribosomal subunit protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 30S ribosomal subunit protein S9; Function of homologous gene experimentally demonstrated in an other organism; structural protein; Belongs to the universal ribosomal protein uS9 family. | 0.996 |
| rplD | rpsL | PSHAa0145 | PSHAa0224 | 50S ribosomal subunit protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 30S ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy. | 0.999 |
| rplD | rpsP | PSHAa0145 | PSHAa0944 | 50S ribosomal subunit protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 30S ribosomal subunit protein S16; Function of homologous gene experimentally demonstrated in an other organism; structural protein; Belongs to the bacterial ribosomal protein bS16 family. | 0.995 |
| rplD | rpsU | PSHAa0145 | PSHAa0352 | 50S ribosomal subunit protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 30S ribosomal subunit protein S21; Function of homologous gene experimentally demonstrated in an other organism; structural protein; Belongs to the bacterial ribosomal protein bS21 family. | 0.956 |
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