fit to screen
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PSHAa0703Homologs of previously reported genes of unknown function; membrane component. (454 aa)    
Predicted Functional Partners:
PSHAa0704
Homologs of previously reported genes of unknown function.
 
   
 0.967
PSHAa0709
Homologs of previously reported genes of unknown function.
 
   
 0.963
PSHAa0706
Homologs of previously reported genes of unknown function; membrane component.
     
 0.860
PSHAa0707
Homologs of previously reported genes of unknown function.
     
 0.859
PSHAa0705
Homologs of previously reported genes of unknown function; membrane component.
  
  
 0.856
PSHAa0708
Homologs of previously reported genes of unknown function.
       0.751
PSHAa2448
Putative endo alpha-1,4 polygalactosaminidase precusor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
 
   
 0.538
PSHAa0702
Putative orphan protein; No homology to any previously reported sequences.
       0.491
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.