STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PSHAa0754Homologs of previously reported genes of unknown function. (197 aa)    
Predicted Functional Partners:
PSHAa0755
Homologs of previously reported genes of unknown function.
 
    
0.894
PSHAa0756
Putative orphan protein; No homology to any previously reported sequences.
 
    
0.885
PSHAa1833
Homologs of previously reported genes of unknown function.
  
     0.769
PSHAa0506
Homologs of previously reported genes of unknown function.
  
     0.757
PSHAa1962
Homologs of previously reported genes of unknown function.
  
     0.742
PSHAa0548
Homologs of previously reported genes of unknown function.
  
     0.724
PSHAa0761
Homologs of previously reported genes of unknown function.
 
   
 0.719
PSHAa2902
Homologs of previously reported genes of unknown function; 11347268, 14672542.
  
     0.710
PSHAa0762
Homologs of previously reported genes of unknown function.
 
  
 0.698
PSHAa0276
Sodium-type polar flagellar protein motX; Function of homologous gene experimentally demonstrated in an other organism; transporter.
  
     0.695
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.