Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PSHAa0756Putative orphan protein; No homology to any previously reported sequences. (219 aa)    
Predicted Functional Partners:
PSHAa0755
Homologs of previously reported genes of unknown function.
 
    
0.887
PSHAa0754
Homologs of previously reported genes of unknown function.
 
    
0.885
PSHAa1833
Homologs of previously reported genes of unknown function.
  
     0.760
PSHAa0761
Homologs of previously reported genes of unknown function.
 
   
 0.756
PSHAa0506
Homologs of previously reported genes of unknown function.
  
     0.749
PSHAa0762
Homologs of previously reported genes of unknown function.
 
  
 0.716
PSHAa0819
Homologs of previously reported genes of unknown function.
  
     0.697
PSHAa2902
Homologs of previously reported genes of unknown function; 11347268, 14672542.
  
     0.653
PSHAa1962
Homologs of previously reported genes of unknown function.
  
     0.645
PSHAa0276
Sodium-type polar flagellar protein motX; Function of homologous gene experimentally demonstrated in an other organism; transporter.
  
     0.639
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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