STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSHAa0761Homologs of previously reported genes of unknown function. (397 aa)    
Predicted Functional Partners:
PSHAa0762
Homologs of previously reported genes of unknown function.
 
   
 0.959
csgF
Putative curli production assembly/transport component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; transporter.
  
 
 0.843
PSHAa2312
Putative orphan protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
 
   0.827
fliL
Putative flagellar protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
 
   0.793
motY
Putative Component of sodium-driven polar flagellar motor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; structural protein.
  
 
 
 0.784
PSHAa0819
Homologs of previously reported genes of unknown function.
  
     0.772
PSHAa0755
Homologs of previously reported genes of unknown function.
 
   
 0.770
PSHAa0817
Homologs of previously reported genes of unknown function.
  
     0.767
PSHAa1833
Homologs of previously reported genes of unknown function.
  
     0.765
PSHAa1210
Putative response regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; regulator.
  
     0.763
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.