Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
fliCFlagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (273 aa)    
Predicted Functional Partners:
fliD
Putative flagellar hook-associated protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
 
 
 0.992
fliS
Putative flagellar biosynthesis protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; regulator.
  
 
 0.984
flgE
Flagellar biosynthesis; Function of strongly homologous gene; structural protein.
 
 
 0.966
flgL
Putative flagellar synthesis; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; structural protein.
 
 
 0.961
fliP
Flagellar biosynthesis; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
 
  
 0.954
PSHAa0782
Putative flagellin (fliC-like); Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
  
 
0.938
fliG
Flagellar biosynthesis; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
 
  
 0.935
flgK
Putative flagellar hook-associated; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; structural protein.
 
 
 0.934
flgC
Flagellar biosynthesis; Function of strongly homologous gene; structural protein; Belongs to the flagella basal body rod proteins family.
 
  
 0.932
motB
Putative chemotaxis protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component.
 
  
 0.918
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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