Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
flaMPutative Sigma-54 dependent response regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; regulator. (486 aa)    
Predicted Functional Partners:
PSHAa0789
Putative sensory box sensor histidine kinase in two-component regulatory system; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; regulator.
 0.996
fliF
Flagellar biosynthesis; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
  
 0.907
fliE
Flagellar biosynthesis; Function of homologous gene experimentally demonstrated in an other organism; structural protein.
 
  
 0.852
fliG
Flagellar biosynthesis; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
  
  
 0.813
fliH
Putative flagellar biosynthesis; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component.
  
  
 0.805
rpoN
Sigma N (sigma 54) factor of RNA polymerase; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
   
 0.796
fliI
Flagellum-specific ATP synthase; Function of strongly homologous gene; enzyme.
  
  
 0.786
motY
Putative Component of sodium-driven polar flagellar motor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; structural protein.
 
  
 0.765
flhG
Putative flagellar biosynthetic protein FlhG; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy.
 
 
 0.741
fliM
Flagellar biosynthesis; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
 
  
 0.715
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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