STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fliEFlagellar biosynthesis; Function of homologous gene experimentally demonstrated in an other organism; structural protein. (96 aa)    
Predicted Functional Partners:
fliF
Flagellar biosynthesis; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
 
 0.999
fliG
Flagellar biosynthesis; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
 
 
 0.999
flgB
Flagellar biosynthesis; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
 
 0.998
flgH
Flagellar biosynthesis; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
 
 0.998
flgC
Flagellar biosynthesis; Function of strongly homologous gene; structural protein; Belongs to the flagella basal body rod proteins family.
 
 
 0.997
flgG
Flagellar biosynthesis; Function of strongly homologous gene; structural protein; Belongs to the flagella basal body rod proteins family.
 
 
 0.997
flgE
Flagellar biosynthesis; Function of strongly homologous gene; structural protein.
 
 
 0.996
flgI
Flagellar P-ring protein precursor (Basal body P-ring protein); Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
 
 0.996
flgJ
Putative flagellar biosynthesis; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; structural protein.
 
  
 0.996
fliH
Putative flagellar biosynthesis; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component.
 
  
 0.996
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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