STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSHAa0875Putative oxidoreductase, short-chain dehydrogenase/reductase family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (265 aa)    
Predicted Functional Partners:
hsdA
3 alpha-hydroxysteroid dehydrogenase/carbonyl reductase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 
 
 0.788
PSHAa1460
Putative 3-oxoacyl-(acyl-carrier protein) reductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
 
 
 
 0.781
PSHAa0909
Putative 3-oxoacyl-[acyl-carrier protein] reductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 
 0.765
PSHAb0409
Putative 3-oxoacyl-[acyl-carrier-protein] reductase (fabG-like); Function of strongly homologous gene; enzyme.
 
 
 
 0.751
PSHAa0897
Putative nonspecific lipid-transfer protein; Homologs of previously reported genes of unknown function.
  
  
 0.441
PSHAa0884
Homologs of previously reported genes of unknown function.
  
     0.408
PSHAb0455
Homologs of previously reported genes of unknown function.
  
     0.404
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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