STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSHAa0877Putative steroid degradation protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme. (406 aa)    
Predicted Functional Partners:
tesB-2
Putative dioxygenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 
  0.976
tesA
TesA protein; Function of strongly homologous gene.
 
 
 0.963
PSHAa0878
Putative reductase protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
 
  
 0.888
PSHAa0887
Homologs of previously reported genes of unknown function.
 
   0.831
tesD
Putative hydrolase acting on oxygenated substrates (epoxide hydrolase); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 
 0.820
teiR
LuxR-type transcription regulator required for testosterone degradation; Function of homologous gene experimentally demonstrated in an other organism; regulator.
 
     0.812
fadB
Fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.
  
 0.810
fadJ
Fatty acid oxidation complex subunit alpha; Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3- hydroxyacyl-CoA dehydrogenase activities. Belongs to the enoyl-CoA hydratase/isomerase family. In the central section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.
  
 0.810
PSHAa0886
Homologs of previously reported genes of unknown function.
 
 0.807
PSHAa0903
Putative enoyl-CoA hydratase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
 
 0.787
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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