STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSHAa0890Putative acyl-CoA dehydrogenase family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme. (370 aa)    
Predicted Functional Partners:
PSHAa0889
Putative acyl-CoA dehydrogenase family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
    
0.981
PSHAa2130
Putative acyl-CoA dehydrogenase family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
 
     0.973
PSHAa0906
Putative isovaleryl-CoA dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
 
     0.969
PSHAa0888
Putative acyl-CoA dehydrogenase family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
    
0.932
fadB
Fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.
  
 0.901
fadJ
Fatty acid oxidation complex subunit alpha; Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3- hydroxyacyl-CoA dehydrogenase activities. Belongs to the enoyl-CoA hydratase/isomerase family. In the central section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.
  
 0.901
paaF
Putative enoyl-CoA hydratase-isomerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme; Belongs to the enoyl-CoA hydratase/isomerase family.
 
  0.862
PSHAa0887
Homologs of previously reported genes of unknown function.
 
   0.843
PSHAa0717
Putative Enoyl-CoA hydratase/isomerase family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.802
PSHAa2481
Putative enoyl-CoA hydratase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
 
  0.794
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.