Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PSHAa0895Putative enzyme; No homology to any previously reported sequences; enzyme. (211 aa)    
Predicted Functional Partners:
PSHAa0894
3-ketoacyl-acyl carrier protein reductase; Function of strongly homologous gene; enzyme.
       0.768
PSHAa0898
Putative acyl dehydratase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
       0.718
PSHAa0896
Putative very-long-chain acyl-CoA synthetase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
       0.709
PSHAa0897
Putative nonspecific lipid-transfer protein; Homologs of previously reported genes of unknown function.
       0.709
tesD
Putative hydrolase acting on oxygenated substrates (epoxide hydrolase); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.476
tesB-2
Putative dioxygenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.417
PSHAa0901
Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit; Function of strongly homologous gene; enzyme.
       0.416
PSHAa0892
Putative electron acceptor reductase/NADH oxidase, FAD binding, iron-sulfur cluster binding site; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
       0.403
PSHAa0904
Putative dioxygenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
  
    0.401
PSHAa0902
Putative acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
       0.400
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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