STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSHAa0906Putative isovaleryl-CoA dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme. (387 aa)    
Predicted Functional Partners:
PSHAa0907
Putative butyryl-CoA dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
     0.982
PSHAa0903
Putative enoyl-CoA hydratase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
 
 0.977
PSHAa0905
Putative enoyl-CoA hydratase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
 
  0.977
PSHAa0890
Putative acyl-CoA dehydrogenase family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
 
     0.969
PSHAa0902
Putative acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
 
  
 0.944
PSHAa0909
Putative 3-oxoacyl-[acyl-carrier protein] reductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  0.935
PSHAa0901
Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit; Function of strongly homologous gene; enzyme.
 
  
 0.934
PSHAa0904
Putative dioxygenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
 
  
 0.931
PSHAa2131
Putative acyl-CoA dehydrogenase family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
    
0.930
tesB-2
Putative dioxygenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
    0.923
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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