STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSHAa0929Putative Type IV pilus biogenesis protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component. (178 aa)    
Predicted Functional Partners:
PSHAa0930
Putative Type IV pilus biogenesis protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component.
 
    
0.847
PSHAa0925
Homologs of previously reported genes of unknown function.
 
  
 0.786
PSHAa0924
Putative type IV pilus biogenesis protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component.
 
  
 0.701
PSHAa0927
Homologs of previously reported genes of unknown function.
 
  
 0.692
pilP
Putative Type IV pilus biogenesis protein PilP; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; structural protein.
  
  
 0.673
pilO
Putative Type IV pilus biogenesis protein PilO; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; structural protein.
 
  
 0.614
pilN
Putative Type IV pilus biogenesis protein PilN; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; structural protein.
 
  
 0.600
pilE
Putative fimbrial protein precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy.
 
  
 0.511
pilM
Putative Type IV pilus biogenesis protein PilM; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; structural protein.
 
   
 0.497
PSHAa1497
Putative Transglutaminase family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
 
     0.465
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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