STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PSHAa0930Putative Type IV pilus biogenesis protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component. (183 aa)    
Predicted Functional Partners:
PSHAa0924
Putative type IV pilus biogenesis protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component.
 
  
 0.827
PSHAa0929
Putative Type IV pilus biogenesis protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component.
 
    
0.818
PSHAa0925
Homologs of previously reported genes of unknown function.
 
  
 0.785
PSHAa0927
Homologs of previously reported genes of unknown function.
 
  
 0.766
glnB
Regulatory protein (P-II) for nitrogen assimilation by glutamine synthetase (ATase); Function of homologous gene experimentally demonstrated in an other organism; regulator; Belongs to the P(II) protein family.
       0.753
pilP
Putative Type IV pilus biogenesis protein PilP; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; structural protein.
  
  
 0.620
pilE
Putative fimbrial protein precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy.
 
  
 0.597
pilO
Putative Type IV pilus biogenesis protein PilO; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; structural protein.
 
  
 0.588
pilN
Putative Type IV pilus biogenesis protein PilN; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; structural protein.
 
  
 0.564
pilZ
Type 4 fimbrial biogenesis protein PILZ; Function of strongly homologous gene.
  
   
 0.504
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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