STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSHAa0930Putative Type IV pilus biogenesis protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component. (183 aa)    
Predicted Functional Partners:
PSHAa0929
Putative Type IV pilus biogenesis protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component.
 
    
0.847
PSHAa0924
Putative type IV pilus biogenesis protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component.
 
  
 0.798
glnB
Regulatory protein (P-II) for nitrogen assimilation by glutamine synthetase (ATase); Function of homologous gene experimentally demonstrated in an other organism; regulator; Belongs to the P(II) protein family.
       0.791
PSHAa0925
Homologs of previously reported genes of unknown function.
 
  
 0.751
PSHAa0927
Homologs of previously reported genes of unknown function.
 
  
 0.713
pilP
Putative Type IV pilus biogenesis protein PilP; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; structural protein.
  
  
 0.571
pilO
Putative Type IV pilus biogenesis protein PilO; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; structural protein.
 
  
 0.540
pilE
Putative fimbrial protein precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy.
 
  
 0.511
pilZ
Type 4 fimbrial biogenesis protein PILZ; Function of strongly homologous gene.
  
   
 0.501
pilN
Putative Type IV pilus biogenesis protein PilN; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; structural protein.
 
  
 0.499
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.