STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
gshAGlutamate--cysteine ligase (Gamma-glutamylcysteine synthetase) (Gamma-ECS) (GCS); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily. (525 aa)    
Predicted Functional Partners:
gshB
Glutathione synthetase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the prokaryotic GSH synthase family.
 
 
 0.988
PSHAa1566
Putative gamma-glutamyltranspeptidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
    
 0.910
gshA-2
Glutamate--cysteine ligase (Gamma-glutamylcysteine synthetase) (Gamma-ECS) (GCS); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily.
  
  
 
0.908
pepN
Aminopeptidase N, a cysteinylglycinase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
     
 0.906
pepB
Aminopeptidase B, a cysteinylglycinase; Probably plays an important role in intracellular peptide degradation.
     
 0.902
pepA-2
Probable cytosol aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
     
 0.902
pepA
Cytosol aminopeptidase (Leucine aminopeptidase, Leucyl aminopeptidase); Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
     
 0.902
PSHAb0302
Putative aminopeptidase; Function of strongly homologous gene; enzyme; Belongs to the peptidase M17 family.
     
 0.902
PSHAa2388
Putative cytosol aminopeptidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme; Belongs to the peptidase M17 family.
     
 0.901
ilvE
Putative branched-chain amino acid aminotransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
     
  0.900
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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