Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PSHAa1129Putative transport protein (ABC superfamily, atp_bind and membrane); Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; transporter. (197 aa)    
Predicted Functional Partners:
PSHAa2542
Putative transport protein (ABC superfamily, periplasmic binding component); Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; transporter.
 
 0.994
PSHAa2543
Putative transport protein (ABC superfamily, membrane); Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; transporter.
 
 
 0.935
PSHAa2540
Putative anti-sigma B factor antagonist; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; factor.
  
 
 0.934
PSHAa2544
Putative transport protein (ABC superfamily, atp-binding); Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; transporter.
 
 
 0.920
PSHAa2541
Putative ABC-type transport system, auxiliary component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; transporter.
  
  
 
0.916
vacJ
Lipoprotein precursor; Function of homologous gene experimentally demonstrated in an other organism; membrane component.
 
 
 
 0.758
PSHAa2606
Putative integral membrane resistance protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; transporter.
  
    0.557
PSHAa1128
Conserved protein of unknown function; Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety; Belongs to the PagL family.
  
    0.538
PSHAa1872
Putative TolA protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; transporter.
  
     0.527
gltB
Glutamate synthase, large subunit, GOGAT; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.512
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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