Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
PSHAa1132Trp repressor binding protein WrbA; Function of homologous gene experimentally demonstrated in an other organism; factor; Belongs to the WrbA family. (184 aa)    
Predicted Functional Partners:
ubiE
Bifunctional protein [Includes: 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2).
     
  0.900
PSHAa1133
Putative arsenate reductase with thioredoxin-like domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
  
    0.892
PSHAa1131
Homologs of previously reported genes of unknown function.
       0.868
PSHAa1134
Putative prenylyltransferase domain and metalloproteases (zincins), catalytic domain; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state.
  
    0.759
PSHAa1135
Putative orphan protein; No homology to any previously reported sequences.
       0.759
PSHAa1559
Homologs of previously reported genes of unknown function.
   
    0.659
PSHAa1214
Conserved protein of unknown function, nucleotide triphosphate hydrolase domain; Homologs of previously reported genes of unknown function.
   
    0.621
osmY
Putative hyperosmotically inducible periplasmic protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy.
   
    0.619
PSHAa0299
Homologs of previously reported genes of unknown function.
   
    0.617
dps
Stress response DNA-binding protein Dps; Function of homologous gene experimentally demonstrated in an other organism; phenotype; Belongs to the Dps family.
  
  
 0.599
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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