Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| PSHAa0365 | PSHAa1134 | PSHAa0365 | PSHAa1134 | Homologs of previously reported genes of unknown function. | Putative prenylyltransferase domain and metalloproteases (zincins), catalytic domain; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | 0.549 |
| PSHAa1131 | PSHAa1132 | PSHAa1131 | PSHAa1132 | Homologs of previously reported genes of unknown function. | Trp repressor binding protein WrbA; Function of homologous gene experimentally demonstrated in an other organism; factor; Belongs to the WrbA family. | 0.890 |
| PSHAa1131 | PSHAa1133 | PSHAa1131 | PSHAa1133 | Homologs of previously reported genes of unknown function. | Putative arsenate reductase with thioredoxin-like domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme. | 0.890 |
| PSHAa1131 | PSHAa1134 | PSHAa1131 | PSHAa1134 | Homologs of previously reported genes of unknown function. | Putative prenylyltransferase domain and metalloproteases (zincins), catalytic domain; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | 0.802 |
| PSHAa1131 | PSHAa1135 | PSHAa1131 | PSHAa1135 | Homologs of previously reported genes of unknown function. | Putative orphan protein; No homology to any previously reported sequences. | 0.802 |
| PSHAa1131 | PSHAa1136 | PSHAa1131 | PSHAa1136 | Homologs of previously reported genes of unknown function. | Putative orphan protein; No homology to any previously reported sequences. | 0.425 |
| PSHAa1131 | yfgO | PSHAa1131 | PSHAa1137 | Homologs of previously reported genes of unknown function. | Putative permease (PerM family); Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; transporter. | 0.492 |
| PSHAa1132 | PSHAa1131 | PSHAa1132 | PSHAa1131 | Trp repressor binding protein WrbA; Function of homologous gene experimentally demonstrated in an other organism; factor; Belongs to the WrbA family. | Homologs of previously reported genes of unknown function. | 0.890 |
| PSHAa1132 | PSHAa1133 | PSHAa1132 | PSHAa1133 | Trp repressor binding protein WrbA; Function of homologous gene experimentally demonstrated in an other organism; factor; Belongs to the WrbA family. | Putative arsenate reductase with thioredoxin-like domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme. | 0.908 |
| PSHAa1132 | PSHAa1134 | PSHAa1132 | PSHAa1134 | Trp repressor binding protein WrbA; Function of homologous gene experimentally demonstrated in an other organism; factor; Belongs to the WrbA family. | Putative prenylyltransferase domain and metalloproteases (zincins), catalytic domain; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | 0.801 |
| PSHAa1132 | PSHAa1135 | PSHAa1132 | PSHAa1135 | Trp repressor binding protein WrbA; Function of homologous gene experimentally demonstrated in an other organism; factor; Belongs to the WrbA family. | Putative orphan protein; No homology to any previously reported sequences. | 0.801 |
| PSHAa1132 | PSHAa1136 | PSHAa1132 | PSHAa1136 | Trp repressor binding protein WrbA; Function of homologous gene experimentally demonstrated in an other organism; factor; Belongs to the WrbA family. | Putative orphan protein; No homology to any previously reported sequences. | 0.425 |
| PSHAa1132 | yfgO | PSHAa1132 | PSHAa1137 | Trp repressor binding protein WrbA; Function of homologous gene experimentally demonstrated in an other organism; factor; Belongs to the WrbA family. | Putative permease (PerM family); Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; transporter. | 0.492 |
| PSHAa1133 | PSHAa1131 | PSHAa1133 | PSHAa1131 | Putative arsenate reductase with thioredoxin-like domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme. | Homologs of previously reported genes of unknown function. | 0.890 |
| PSHAa1133 | PSHAa1132 | PSHAa1133 | PSHAa1132 | Putative arsenate reductase with thioredoxin-like domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme. | Trp repressor binding protein WrbA; Function of homologous gene experimentally demonstrated in an other organism; factor; Belongs to the WrbA family. | 0.908 |
| PSHAa1133 | PSHAa1134 | PSHAa1133 | PSHAa1134 | Putative arsenate reductase with thioredoxin-like domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme. | Putative prenylyltransferase domain and metalloproteases (zincins), catalytic domain; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | 0.936 |
| PSHAa1133 | PSHAa1135 | PSHAa1133 | PSHAa1135 | Putative arsenate reductase with thioredoxin-like domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme. | Putative orphan protein; No homology to any previously reported sequences. | 0.802 |
| PSHAa1133 | PSHAa1136 | PSHAa1133 | PSHAa1136 | Putative arsenate reductase with thioredoxin-like domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme. | Putative orphan protein; No homology to any previously reported sequences. | 0.425 |
| PSHAa1133 | yfgO | PSHAa1133 | PSHAa1137 | Putative arsenate reductase with thioredoxin-like domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme. | Putative permease (PerM family); Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; transporter. | 0.492 |
| PSHAa1134 | PSHAa0365 | PSHAa1134 | PSHAa0365 | Putative prenylyltransferase domain and metalloproteases (zincins), catalytic domain; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | Homologs of previously reported genes of unknown function. | 0.549 |
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