Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
PSHAa1135Putative orphan protein; No homology to any previously reported sequences. (221 aa)    
Predicted Functional Partners:
PSHAa1134
Putative prenylyltransferase domain and metalloproteases (zincins), catalytic domain; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state.
       0.868
PSHAa1131
Homologs of previously reported genes of unknown function.
       0.760
PSHAa1133
Putative arsenate reductase with thioredoxin-like domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
       0.760
PSHAa1132
Trp repressor binding protein WrbA; Function of homologous gene experimentally demonstrated in an other organism; factor; Belongs to the WrbA family.
       0.759
yfgO
Putative permease (PerM family); Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; transporter.
       0.598
PSHAa1136
Putative orphan protein; No homology to any previously reported sequences.
       0.538
PSHAa1138
Putative enzyme of the cysteine desulfurase family, metallo-beta-lactamase superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
       0.429
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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