Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PSHAa1136Putative orphan protein; No homology to any previously reported sequences. (72 aa)    
Predicted Functional Partners:
yfgO
Putative permease (PerM family); Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; transporter.
       0.782
PSHAa1138
Putative enzyme of the cysteine desulfurase family, metallo-beta-lactamase superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
       0.660
PSHAa1134
Putative prenylyltransferase domain and metalloproteases (zincins), catalytic domain; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state.
       0.538
PSHAa1135
Putative orphan protein; No homology to any previously reported sequences.
       0.538
PSHAa1131
Homologs of previously reported genes of unknown function.
       0.425
PSHAa1132
Trp repressor binding protein WrbA; Function of homologous gene experimentally demonstrated in an other organism; factor; Belongs to the WrbA family.
       0.425
PSHAa1133
Putative arsenate reductase with thioredoxin-like domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
       0.425
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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