Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
cysBCys regulon transcriptional activator (LysR family); Function of strongly homologous gene; regulator; Belongs to the LysR transcriptional regulatory family. (325 aa)    
Predicted Functional Partners:
PSHAb0105
Putative transcriptional regulator (LysR family); Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.696
PSHAa0979
Putative transcriptional regulator (LysR family); Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; factor; Belongs to the LysR transcriptional regulatory family.
  
     0.665
PSHAb0249
Putative transcriptional regulator, LysR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; factor; Belongs to the LysR transcriptional regulatory family.
  
     0.657
rseB
Putative anti sigma E (sigma 24) factor, negative regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; factor.
  
     0.633
PSHAa2215
Putative transcriptional regulator LysR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; factor; Belongs to the LysR transcriptional regulatory family.
  
     0.612
PSHAb0146
Putative transcriptional regulator (LysR family); Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.591
PSHAb0213
Putative transcriptional regulator, LysR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.583
PSHAa2189
Putative Transcriptional regulator, LysR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.579
PSHAa0850
Putative transcriptional activator IlvY (LysR family); Function of homologous gene experimentally demonstrated in an other organism; regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.568
PSHAa1387
Transcriptional regulator, LysR family; Function of strongly homologous gene; regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.567
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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