Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PSHAa1214Conserved protein of unknown function, nucleotide triphosphate hydrolase domain; Homologs of previously reported genes of unknown function. (640 aa)    
Predicted Functional Partners:
PSHAa1213
Homologs of previously reported genes of unknown function; Belongs to the UPF0229 family.
  
 0.999
PSHAa1212
Homologs of previously reported genes of unknown function.
 
  
 0.995
PSHAa1559
Homologs of previously reported genes of unknown function.
   
    0.696
sodB
Iron superoxide dismutase; Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
    0.673
PSHAa1132
Trp repressor binding protein WrbA; Function of homologous gene experimentally demonstrated in an other organism; factor; Belongs to the WrbA family.
   
    0.621
dps
Stress response DNA-binding protein Dps; Function of homologous gene experimentally demonstrated in an other organism; phenotype; Belongs to the Dps family.
   
    0.613
dpsB
DNA-binding DPS protein; Function of homologous gene experimentally demonstrated in an other organism; factor; Belongs to the Dps family.
   
    0.613
PSHAa1732
Conserved protein of unknown function with protein kinase-like domain; Homologs of previously reported genes of unknown function; Belongs to the fructosamine kinase family.
   
    0.592
PSHAa1737
Putative catalase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
   
  
 0.567
katB
Catalase; Function of strongly homologous gene; enzyme; Belongs to the catalase family.
   
  
 0.567
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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