Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PSHAa1297Putative cytochrome; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component. (184 aa)    
Predicted Functional Partners:
PSHAa1298
Homologs of previously reported genes of unknown function; ; Belongs to the UPF0312 family.
 
  
 0.960
PSHAa2755
Homologs of previously reported genes of unknown function; Belongs to the UPF0312 family.
 
  
 0.515
trpH
Homologs of previously reported genes of unknown function; enzyme.
       0.498
yciO
Putative RNA binding protein with YrdC/RibB domain; Homologs of previously reported genes of unknown function; factor; Belongs to the SUA5 family.
       0.498
PSHAa1296
Conserved protein of unknown function; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
       0.498
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
Server load: low (22%) [HD]