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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Knowledge-based Evidence
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Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
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PSHAa1330Putative D-alanyl-D-alanine carboxypeptidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme. (241 aa)    
Predicted Functional Partners:
dapE
Succinyl-diaminopimelate desuccinylase (SDAP); Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily.
     
 0.871
PSHAa1332
Putative enzyme with thioredoxin-like domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme; Belongs to the ArsC family.
       0.868
PSHAa1333
Putative PTS system protein (partial match); Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy.
       0.804
PSHAa1334
Putative orphan protein; No homology to any previously reported sequences.
       0.773
PSHAa0125
Homologs of previously reported genes of unknown function.
  
     0.611
PSHAa1336
Homologs of previously reported genes of unknown function; membrane component.
 
     0.538
PSHAa1335
Putative orphan protein; Doubtful CDS.
       0.526
PSHAa0242
Putative general secretion pathway protein N; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy.
  
     0.496
PSHAa2432
Homologs of previously reported genes of unknown function.
  
     0.481
PSHAa2459
Putative membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component.
  
     0.471
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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