Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PSHAa1338Homologs of previously reported genes of unknown function; membrane component. (210 aa)    
Predicted Functional Partners:
PSHAa1337
Putative 23S rRNA m1G745 methyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.868
xthA
Exonuclease III; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.845
PSHAa1846
Homologs of previously reported genes of unknown function.
  
     0.681
PSHAa1627
Homologs of previously reported genes of unknown function.
  
     0.612
PSHAa0110
Putative DnaJ-class molecular chaperone; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; molecular chaperone.
  
     0.489
PSHAa0761
Homologs of previously reported genes of unknown function.
  
     0.481
PSHAa1674
Putative membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component.
  
     0.468
fliJ
Flagellar protein; Function of strongly homologous gene; structural protein.
  
     0.464
PSHAa1088
Homologs of previously reported genes of unknown function.
  
     0.457
PSHAa1320
Putative orphan protein; No homology to any previously reported sequences.
  
     0.452
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.