Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PSHAa1347Conserved putatively secreted protein of unknown function; Homologs of previously reported genes of unknown function. (1103 aa)    
Predicted Functional Partners:
PSHAb0200
Putative secreted serine protease, subtilisin family, possibly excreted; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme; Belongs to the peptidase S8 family.
  
 
 0.842
PSHAa1346
Putative proton/glutamate symporter; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
       0.676
PSHAa0524
Homologs of previously reported genes of unknown function.
  
     0.632
PSHAa1575
Putative outer membrane porin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component.
  
    0.598
PSHAa0927
Homologs of previously reported genes of unknown function.
 
   
 0.593
PSHAa1716
Putative cell division protein with DNA segregation ATPase FtsK/SpoIIIE domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component.
    
 
 0.583
PSHAa1561
Putative orphan protein; No homology to any previously reported sequences.
  
     0.572
PSHAa1196
Putative orphan protein; No homology to any previously reported sequences; membrane component.
  
     0.556
PSHAa2457
Putative TonB-dependent receptor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; transporter.
  
 
   0.520
PSHAb0512
Putative Ton-B dependent protein (could be involved in iron transport); Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy.
  
     0.505
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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