Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
adhCAlcohol dehydrogenase class III; Function of strongly homologous gene; enzyme; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. (373 aa)    
Predicted Functional Partners:
PSHAa1385
Putative esterase; Serine hydrolase involved in the detoxification of formaldehyde.
 0.999
adhP
Alcohol dehydrogenase, propanol-preferring; Function of strongly homologous gene; enzyme.
  
 
0.934
aldB
Aldehyde dehydrogenase B (wide specificity); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the aldehyde dehydrogenase family.
  
 0.911
mhpF
Acetaldehyde dehydrogenase; Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds.
     
 0.903
adhC-2
Alcohol dehydrogenase class III (Glutathione-dependent formaldehyde dehydrogenase)(FDH) (FALDH); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
  
  
 
0.900
PSHAa1387
Transcriptional regulator, LysR family; Function of strongly homologous gene; regulator; Belongs to the LysR transcriptional regulatory family.
       0.588
tadA
tRNA-specific adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
  
    0.533
lolC
Transport protein of outer membrane lipoproteins (ABC superfamily, membrane); Function of homologous gene experimentally demonstrated in an other organism; transporter.
       0.416
lolD
Transport protein of inner membrane lipoproteins (ABC superfamily, ATP-binding); Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner.
       0.416
lolE
Putative lipoprotein releasing system transmembrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component.
       0.416
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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