Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
fadH2,4-dienoyl-CoA reductase [NADPH]; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (657 aa)    
Predicted Functional Partners:
gltB
Glutamate synthase, large subunit, GOGAT; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 
 0.999
etfB
Electron transfer flavoprotein beta subunit; Function of homologous gene experimentally demonstrated in an other organism.
  
 
 0.927
etfA
Electron transfer flavoprotein alpha subunit; Function of homologous gene experimentally demonstrated in an other organism.
  
 
 0.895
PSHAa2923
Putative Glutamate synthase GltB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme; Belongs to the glutamate synthase family.
 
 
 0.879
fadB
Fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.
 
  
 0.757
fre
NAD(P)H-flavin reductase; Function of strongly homologous gene; enzyme.
  
 
 0.728
fadJ
Fatty acid oxidation complex subunit alpha; Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3- hydroxyacyl-CoA dehydrogenase activities. Belongs to the enoyl-CoA hydratase/isomerase family. In the central section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.
  
  
 0.721
ydiJ
Putative Fe-S oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
  
  
 0.715
sppA
Protease IV, a signal peptide peptidase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.693
ansA
L-asparaginase I(L-asparagine amidohydrolase I) (L-ASNase I); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
     
 0.677
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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