STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSHAa1443Homologs of previously reported genes of unknown function; regulator. (220 aa)    
Predicted Functional Partners:
PSHAa1442
Putative allophanate hydrolase; Function of strongly homologous gene; enzyme.
 0.999
PSHAb0064
Putative lactam utilization protein B; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
 
 0.999
PSHAa1566
Putative gamma-glutamyltranspeptidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
   
 
  0.910
PSHAa0334
Homologs of previously reported genes of unknown function.
    
  0.900
gshA
Glutamate--cysteine ligase (Gamma-glutamylcysteine synthetase) (Gamma-ECS) (GCS); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily.
     
  0.900
PSHAa1173
Homologs of previously reported genes of unknown function.
 
  
 0.900
gshA-2
Glutamate--cysteine ligase (Gamma-glutamylcysteine synthetase) (Gamma-ECS) (GCS); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily.
     
  0.900
pcp
Pyrrolidone-carboxylate peptidase; Removes 5-oxoproline from various penultimate amino acid residues except L-proline; Belongs to the peptidase C15 family.
  
    0.828
gltB
Glutamate synthase, large subunit, GOGAT; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
   
 
  0.812
glnA
Glutamine synthetase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
    
 0.811
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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