Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PSHAa1482Putative orphan protein; No homology to any previously reported sequences. (219 aa)    
Predicted Functional Partners:
PSHAa1477
Probable nitrite reductase (EC 1.7.99.3); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the multicopper oxidase family.
 
  
 0.791
PSHAa1476
Homologs of previously reported genes of unknown function.
 
   
 0.718
PSHAa2872
Cytochrome c oxidase, subunit II (partial); Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 0.693
dsbE
Putative thiol:disulfide interchange protein; Function of strongly homologous gene; enzyme.
 
 
 0.656
fliC
Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
      
 0.625
PSHAa2866
Putative Cytochrome oxidase assembly protein; Function of strongly homologous gene; membrane component.
  
 0.622
PSHAa2864
Putative SCO1/SenC family protein (copper-binding protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; transporter.
  
     0.620
PSHAa2870
Cytochrome c oxidase assembly protein coxG; Function of strongly homologous gene; membrane component.
  
 0.616
cyoA
Ubiquinol oxidase subunit 2; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 0.557
PSHAa2868
Putative transmembrane cytochrome oxidase complex biogenesis factor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component.
  
 
 0.494
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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