Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PSHAa1485Putative Serine/threonine protein kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme. (604 aa)    
Predicted Functional Partners:
BckdhA
2-oxoisovalerate dehydrogenase E1 component alpha subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
     0.659
PSHAa1486
Homologs of previously reported genes of unknown function.
       0.614
PSHAa2305
Putative orphan protein; No homology to any previously reported sequences.
  
     0.574
bkdA2
2-oxoisovalerate dehydrogenase E1 component beta subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
     0.541
dbT
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
     0.522
pepA-2
Probable cytosol aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
       0.483
glnS
Glutamine tRNA synthetase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.466
rsxA
Electron transport complex protein rnfA, inner membrane protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
   
    0.444
PSHAa2436
Homologs of previously reported genes of unknown function.
  
     0.434
PSHAa2489
Putative glutathione S-transferase enzyme with thioredoxin-like domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
  
     0.433
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.