STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSHAa1501Putative response regulator receiver in two-component signal transduction system; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy. (127 aa)    
Predicted Functional Partners:
cheA
Chemotaxis protein cheA; Function of homologous gene experimentally demonstrated in an other organism; regulator.
 
 0.967
fliN
Flagellar biosynthesis; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
  
 
 0.939
PSHAa0492
Homologs of previously reported genes of unknown function.
    
  0.901
cheZ
Chemotaxis protein cheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P).
   
 
 0.901
PSHAa1497
Putative Transglutaminase family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
       0.881
PSHAa1499
Homologs of previously reported genes of unknown function; membrane component.
       0.881
moxR
MoxR protein; Function of strongly homologous gene.
       0.881
PSHAa1496
Homologs of previously reported genes of unknown function; membrane component.
       0.852
PSHAb0518
Putative Chemotactic transducer; Function of strongly homologous gene; factor.
  
 
  0.818
PSHAb0277
Putative methyl-accepting chemotaxis protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component.
  
 
  0.802
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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