Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PSHAa1510Homologs of previously reported genes of unknown function. (579 aa)    
Predicted Functional Partners:
PSHAa1509
Homologs of previously reported genes of unknown function.
 
    0.952
PSHAa1505
Putative phage protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy.
 
     0.939
PSHAa1508
Homologs of previously reported genes of unknown function.
 
     0.926
PSHAa1523
Homologs of previously reported genes of unknown function.
 
    0.854
PSHAa1511
Putative orphan protein; No homology to any previously reported sequences.
  
    0.814
PSHAa1522
Homologs of previously reported genes of unknown function.
 
     0.794
PSHAa1512
Putative orphan protein; No homology to any previously reported sequences.
       0.782
PSHAa1506
Homologs of previously reported genes of unknown function; membrane component.
       0.777
PSHAa1507
Putative orphan protein; No homology to any previously reported sequences.
       0.770
PSHAa1513
Homologs of previously reported genes of unknown function.
       0.768
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.