Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PSHAa1567Putative rhomboid family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component. (194 aa)    
Predicted Functional Partners:
PSHAa1566
Putative gamma-glutamyltranspeptidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
       0.766
gspC
Putative general secretion pathway protein C; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; transporter.
  
     0.758
PSHAa0240
Putative general secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
     0.754
PSHAa1344
Homologs of previously reported genes of unknown function.
 
    0.754
gspH
Putative general secretion pathway protein H precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; transporter.
 
     0.718
PSHAa0241
Putative general secretion pathway protein M; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
     0.717
PSHAa0242
Putative general secretion pathway protein N; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy.
 
     0.711
gspJ
Putative general secretion pathway protein J [Precursor]; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; transporter.
 
     0.647
PSHAa1493
Homologs of previously reported genes of unknown function.
 
     0.611
PSHAa2750
Homologs of previously reported genes of unknown function.
  
     0.595
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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