Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PSHAa1568Putative enzymatic protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme. (834 aa)    
Predicted Functional Partners:
PSHAa0470
Homologs of previously reported genes of unknown function.
  
     0.721
PSHAa2646
Homologs of previously reported genes of unknown function.
  
     0.714
PSHAa2859
Homologs of previously reported genes of unknown function.
  
     0.705
PSHAa2436
Homologs of previously reported genes of unknown function.
  
     0.635
PSHAa0464
Homologs of previously reported genes of unknown function.
  
     0.630
PSHAa2889
Putative secreted protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy.
  
     0.605
PSHAa0187
Homologs of previously reported genes of unknown function.
  
     0.588
PSHAa1569
Putative orphan protein; No homology to any previously reported sequences.
 
    0.582
PSHAa1628
Putative Glutamate carboxypeptidase II; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
  
    0.563
PSHAa1017
Homologs of previously reported genes of unknown function.
  
    0.528
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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