STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSHAa1620Homologs of previously reported genes of unknown function; enzyme. (154 aa)    
Predicted Functional Partners:
etfdH
Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone.
       0.784
PSHAa1495
Putative cytosolic long-chain acyl-CoA thioester hydrolase family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
 
     0.777
PSHAa1622
Homologs of previously reported genes of unknown function.
       0.674
etfA
Electron transfer flavoprotein alpha subunit; Function of homologous gene experimentally demonstrated in an other organism.
       0.658
etfB
Electron transfer flavoprotein beta subunit; Function of homologous gene experimentally demonstrated in an other organism.
       0.658
PSHAa1329
Homologs of previously reported genes of unknown function; membrane component.
 
      0.563
PSHAa1621
Putative TonB-dependent receptor protein with OmpA-like transmembrane domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; leader peptide; Belongs to the outer membrane OOP (TC 1.B.6) superfamily.
       0.486
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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