Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PSHAa1629Putative membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component. (390 aa)    
Predicted Functional Partners:
PSHAa1628
Putative Glutamate carboxypeptidase II; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
       0.745
PSHAa1625
Putative ABC-type Na+ efflux pump, permease component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; transporter.
       0.677
PSHAa1626
Sodium ABC exporter ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; transporter.
       0.677
PSHAa1627
Homologs of previously reported genes of unknown function.
       0.677
PSHAa1798
Homologs of previously reported genes of unknown function.
  
     0.462
PSHAa1799
Homologs of previously reported genes of unknown function.
  
     0.409
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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