Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PSHAa1675Homologs of previously reported genes of unknown function. (58 aa)    
Predicted Functional Partners:
pepN
Aminopeptidase N, a cysteinylglycinase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.800
PSHAa1677
Putative Na+/H+ antiporter NnaC; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; carrier.
       0.749
PSHAa1674
Putative membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component.
       0.689
prc
Periplasmic carboxy-terminal protease with specificity for non-polar C-termini; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; ; Belongs to the peptidase S41A family.
       0.658
proQ
Putative post-translational activator of ProP expression; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family.
       0.638
PSHAa1673
Homologs of previously reported genes of unknown function.
       0.635
PSHAa1681
Homologs of previously reported genes of unknown function.
       0.617
PSHAa1680
Putative orphan protein; No homology to any previously reported sequences.
       0.592
PSHAa1671
Putative predicted exporter of the RND superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; transporter.
       0.402
PSHAa1672
Putative orphan protein; No homology to any previously reported sequences.
       0.402
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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