Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
prcPeriplasmic carboxy-terminal protease with specificity for non-polar C-termini; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; ; Belongs to the peptidase S41A family. (674 aa)    
Predicted Functional Partners:
proQ
Putative post-translational activator of ProP expression; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family.
 
  
 0.880
PSHAa1681
Homologs of previously reported genes of unknown function.
     
 0.839
PSHAa1680
Putative orphan protein; No homology to any previously reported sequences.
       0.819
nlpI
Lipoprotein probably involved in cell division after interaction with a protease; May be involved in cell division.
  
 
 
 0.807
PSHAa1682
Putative membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy.
       0.712
PSHAa1675
Homologs of previously reported genes of unknown function.
       0.658
zipA
Putative Cell division protein zipA homolog; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins.
  
     0.643
PSHAa0365
Homologs of previously reported genes of unknown function.
  
  
 0.546
oadA
Oxaloacetate decarboxylase, alpha subunit; Function of strongly homologous gene; enzyme.
  
    0.499
PSHAa1677
Putative Na+/H+ antiporter NnaC; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; carrier.
       0.499
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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