Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PSHAa1693Putative enzyme with RmlC-like domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme. (381 aa)    
Predicted Functional Partners:
PSHAa1694
Putative Glr3403 protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy.
       0.863
hflD
Homologs of previously reported genes of unknown function.
 
  
 0.795
mnmA
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
     
 0.791
purB
Adenylosuccinate lyase; Function of strongly homologous gene; enzyme; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
     
 0.780
rplP
50S ribosomal subunit protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.
    
 
 0.746
PSHAb0508
Homologs of previously reported genes of unknown function.
  
     0.495
rluE
Ribosomal large subunit pseudouridine synthase E (Pseudouridylate synthase) (Uracil hydrolyase); Function of strongly homologous gene; enzyme; Belongs to the pseudouridine synthase RsuA family.
 
    0.454
PSHAa2309
Putative prolyl 4-hydroxylase, alpha subunit domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
 
     0.435
argS
arginyl-tRNA synthetase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
   
    0.431
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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