Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PSHAa1737Putative catalase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme. (506 aa)    
Predicted Functional Partners:
katB
Catalase; Function of strongly homologous gene; enzyme; Belongs to the catalase family.
  
  
 
0.911
PSHAa0055
Putative pyridoxal phosphate dependent enzyme; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
     
 0.902
sodB
Iron superoxide dismutase; Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
 0.689
msrC
Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 
 0.657
PSHAa0886
Homologs of previously reported genes of unknown function.
   
 0.596
PSHAa0898
Putative acyl dehydratase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
   
 0.596
PSHAa2150
Homologs of previously reported genes of unknown function; enzyme.
   
 0.596
PSHAa1214
Conserved protein of unknown function, nucleotide triphosphate hydrolase domain; Homologs of previously reported genes of unknown function.
   
  
 0.567
osmY
Putative hyperosmotically inducible periplasmic protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy.
   
  
 0.546
ahpF
Alkyl hydroperoxide reductase subunit F (Alkyl hydroperoxide reductase F52A protein); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
  
 0.538
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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