Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ureCUrease, alpha subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family. (567 aa)    
Predicted Functional Partners:
ureA
Urease, gamma subunit; Function of strongly homologous gene; enzyme; Belongs to the urease gamma subunit family.
 0.999
ureB
Urease beta subunit (Urea amidohydrolase); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the urease beta subunit family.
 0.999
ureG
Urease accessory protein; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.
  
 0.989
ureF
Putative urease accessory protein UreF; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
 
 
 0.988
ureD
Putative urease accessory protein UreD; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
 
 
 0.961
ureE
Putative urease accessory chaperone protein; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family.
 
  
 0.947
glnA
Glutamine synthetase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
      
 0.806
PSHAa1763
Homologs of previously reported genes of unknown function.
     
 0.679
gltB
Glutamate synthase, large subunit, GOGAT; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
      
 0.576
fbp
Fructose-1,6-bisphosphatase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
      
 0.515
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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