STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
galKGalactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily. (381 aa)    
Predicted Functional Partners:
galT
Galactose-1-phosphate uridylyltransferase; Function of strongly homologous gene; enzyme.
 0.999
galM
Galactose-1-epimerase (mutarotase); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 0.997
galE
UDP-galactose 4-epimerase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
 
 0.967
PSHAb0257
Putative oxidoreductase/dehydrogenase family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
 
 
 0.850
rpsL
30S ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy.
      
 0.816
PSHAa1768
Putative sodium/hexose cotransport protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; transporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
     0.796
PSHAa1771
Putative GalR repressor of contiguous operon, likely to bind a galactoside; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; regulator.
 
  
 0.691
galU
UTP-glucose-1-phosphate uridylyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
     
 0.661
ugd
UDP-glucose 6-dehydrogenase; Function of strongly homologous gene; enzyme.
      
 0.582
folK
2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
     
 0.561
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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