Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
wcaJUDP-glucose lipid carrier transferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (467 aa)    
Predicted Functional Partners:
PSHAa1780
Putative Exopolysaccharide biosynthesis protein; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
  
 0.999
PSHAa1781
Putative polysaccharide export-related protein; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
  
 0.993
cpsB
Putative mannose-1-phosphate guanyltransferase, colanic acid synthesis; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.992
PSHAa0400
Putative aminotransferase, DegT/DnrJ/EryC1/StrS family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.971
PSHAa1790
Homologs of previously reported genes of unknown function.
 
  
 0.965
PSHAa1779
Putative Capsular polysaccharide biosynthesis, capC; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
  
 0.942
PSHAa1787
Homologs of previously reported genes of unknown function.
  
  
 0.919
PSHAa0398
Putative polysaccharide export family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; transporter.
  
  
 0.917
PSHAa1797
Homologs of previously reported genes of unknown function.
 
  
 0.916
PSHAa2996
Putative carbohydrate o-acetyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; enzyme.
  
  
 0.906
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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