Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
PSHAa1797Homologs of previously reported genes of unknown function. (441 aa)    
Predicted Functional Partners:
PSHAa1780
Putative Exopolysaccharide biosynthesis protein; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
  
 0.937
wcaJ
UDP-glucose lipid carrier transferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
  
 0.916
cpsB
Putative mannose-1-phosphate guanyltransferase, colanic acid synthesis; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the mannose-6-phosphate isomerase type 2 family.
 
  
 0.864
PSHAa1781
Putative polysaccharide export-related protein; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
  
 0.788
PSHAa1782
Homologs of previously reported genes of unknown function.
 
     0.786
PSHAa1779
Putative Capsular polysaccharide biosynthesis, capC; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
    0.680
PSHAa1794
Homologs of previously reported genes of unknown function.
 
     0.644
PSHAa1790
Homologs of previously reported genes of unknown function.
 
  
 0.636
PSHAa1795
Homologs of previously reported genes of unknown function.
 
     0.632
PSHAa1796
Putative orphan protein; No homology to any previously reported sequences.
       0.616
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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