Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PSHAa1825Putative transmembrane sensor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy. (358 aa)    
Predicted Functional Partners:
PSHAa1826
Putative sigma factor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; factor; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.972
PSHAa1584
Putative TonB-dependent receptor for ferrichrome transport; Function of homologous gene experimentally demonstrated in an other organism; receptor.
 
 
 0.872
PSHAa0695
Putative outer membrane receptor for ferric iron uptake; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; membrane component.
 
 
 0.871
PSHAb0279
Putative outer membrane receptor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; receptor.
 
 
 0.820
PSHAa1824
Putative ferric enterobactin receptor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; transporter.
 
  
 0.749
PSHAa1862
Putative TonB-dependent receptor; Function of homologous gene experimentally demonstrated in an other organism; receptor.
 
 
 0.729
PSHAa2478
Putative TonB-dependent receptor protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; receptor.
  
 
 0.663
PSHAa2119
Putative TonB-dependent receptor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy.
 
  
 0.662
PSHAa1415
Homologs of previously reported genes of unknown function; membrane component.
 
  
 0.638
PSHAa1352
Putative TonB-dependent receptor protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homolgy; receptor.
 
  
 0.626
Your Current Organism:
Pseudoalteromonas haloplanktis
NCBI taxonomy Id: 326442
Other names: P. haloplanktis TAC125, Pseudoalteromonas haloplanktis TAC125, Pseudoalteromonas haloplanktis str. TAC125, Pseudoalteromonas haloplanktis strain TAC125
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